Last updated on 2026-08-03 12:51:22 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-gcc | 0.3.0 | 1.68 | 21.45 | 23.13 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.3.0 | 42.26 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3.0 | 20.21 | OK | |||
| r-devel-windows-x86_64 | 0.3.0 | 8.00 | 67.00 | 75.00 | OK | |
| r-release-linux-x86_64 | 0.3.0 | 1.92 | 24.85 | 26.77 | ERROR | |
| r-release-macos-arm64 | 0.3.0 | 1.00 | 11.00 | 12.00 | OK | |
| r-release-macos-x86_64 | 0.3.0 | 2.00 | 46.00 | 48.00 | OK | |
| r-release-windows-x86_64 | 0.3.0 | 7.00 | 72.00 | 79.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.0 | 1.00 | 14.00 | 15.00 | OK | |
| r-oldrel-macos-x86_64 | 0.3.0 | 2.00 | 49.00 | 51.00 | OK | |
| r-oldrel-windows-x86_64 | 0.3.0 | 7.00 | 60.00 | 67.00 | OK |
Version: 0.3.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [2s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biocharkitgui)
>
> test_check("biocharkitgui")
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 58 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-report.R:41:3'): gui_render_report renders a real HTML file from a populated store ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─biocharkitgui::gui_render_report(store, out) at test-report.R:41:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
── Error ('test-report.R:58:3'): gui_render_report handles an entirely empty store gracefully ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─biocharkitgui::gui_render_report(empty_store, out) at test-report.R:58:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 58 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.0
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp0gQtaz’ ‘~/tmp/scratch/Rtmp2K5p5e’
‘~/tmp/scratch/Rtmp3SCAlX’ ‘~/tmp/scratch/Rtmp3bQJyC’
‘~/tmp/scratch/Rtmp3qbb6P’ ‘~/tmp/scratch/Rtmp42sJed’
‘~/tmp/scratch/Rtmp4nFatf’ ‘~/tmp/scratch/Rtmp4p4LIF’
‘~/tmp/scratch/Rtmp4xq11x’ ‘~/tmp/scratch/Rtmp65Mrji’
‘~/tmp/scratch/Rtmp76YVjY’ ‘~/tmp/scratch/Rtmp8E93aK’
‘~/tmp/scratch/Rtmp8lnWWX’ ‘~/tmp/scratch/Rtmp8sUFiA’
‘~/tmp/scratch/Rtmp982oe1’ ‘~/tmp/scratch/RtmpAMyC29’
‘~/tmp/scratch/RtmpBE6VOa’ ‘~/tmp/scratch/RtmpCAvjtT’
‘~/tmp/scratch/RtmpCC93ai’ ‘~/tmp/scratch/RtmpCDI1L4’
‘~/tmp/scratch/RtmpCIGEkg’ ‘~/tmp/scratch/RtmpCeNMhi’
‘~/tmp/scratch/RtmpDHDWB9’ ‘~/tmp/scratch/RtmpDVo3XI’
‘~/tmp/scratch/RtmpDsaGqQ’ ‘~/tmp/scratch/RtmpF5UHgi’
‘~/tmp/scratch/RtmpFEJMKN’ ‘~/tmp/scratch/RtmpFVJjYz’
‘~/tmp/scratch/RtmpFuka2c’ ‘~/tmp/scratch/RtmpGm3HU5’
‘~/tmp/scratch/RtmpGpkWXb’ ‘~/tmp/scratch/RtmpI4412Z’
‘~/tmp/scratch/RtmpJ9DSTA’ ‘~/tmp/scratch/RtmpKfTz8d’
‘~/tmp/scratch/RtmpKrznSj’ ‘~/tmp/scratch/RtmpMaDl4a’
‘~/tmp/scratch/RtmpMxOhWT’ ‘~/tmp/scratch/RtmpQJpqXp’
‘~/tmp/scratch/RtmpQeZgPy’ ‘~/tmp/scratch/RtmpQiA9Lt’
‘~/tmp/scratch/RtmpQwJIll’ ‘~/tmp/scratch/RtmpRFrP8l’
‘~/tmp/scratch/RtmpRY9oUG’ ‘~/tmp/scratch/RtmpRZX0wU’
‘~/tmp/scratch/RtmpSlVhNW’ ‘~/tmp/scratch/RtmpT1rAvW’
‘~/tmp/scratch/RtmpT7W5wD’ ‘~/tmp/scratch/RtmpVT5G63’
‘~/tmp/scratch/RtmpWu5sbd’ ‘~/tmp/scratch/RtmpXLT6XC’
‘~/tmp/scratch/RtmpXfcOEK’ ‘~/tmp/scratch/RtmpXvwEmm’
‘~/tmp/scratch/RtmpXyyRxx’ ‘~/tmp/scratch/RtmpZ4CWa6’
‘~/tmp/scratch/RtmpZS1NRc’ ‘~/tmp/scratch/RtmpadZJT0’
‘~/tmp/scratch/Rtmpaoyig3’ ‘~/tmp/scratch/RtmpasWMgn’
‘~/tmp/scratch/Rtmpcxb51n’ ‘~/tmp/scratch/RtmpdRYRhq’
‘~/tmp/scratch/Rtmpf2H775’ ‘~/tmp/scratch/Rtmpf49QpR’
‘~/tmp/scratch/Rtmpf4fedQ’ ‘~/tmp/scratch/RtmpfTiAgj’
‘~/tmp/scratch/Rtmpfg7Uno’ ‘~/tmp/scratch/RtmpiK8js9’
‘~/tmp/scratch/Rtmpj4nKye’ ‘~/tmp/scratch/RtmpkyACzf’
‘~/tmp/scratch/RtmplU33hk’ ‘~/tmp/scratch/RtmpmDXAXY’
‘~/tmp/scratch/RtmpmfM6Bq’ ‘~/tmp/scratch/Rtmpp0SIaf’
‘~/tmp/scratch/RtmpqnPu5U’ ‘~/tmp/scratch/RtmpqvWJzM’
‘~/tmp/scratch/RtmprXvrdz’ ‘~/tmp/scratch/Rtmps4LcWC’
‘~/tmp/scratch/RtmpsYakxK’ ‘~/tmp/scratch/RtmpsjQvwM’
‘~/tmp/scratch/Rtmptn7hv6’ ‘~/tmp/scratch/Rtmptz8LOn’
‘~/tmp/scratch/RtmpuFMPv5’ ‘~/tmp/scratch/RtmpwKkxVK’
‘~/tmp/scratch/RtmpwRPh0J’ ‘~/tmp/scratch/RtmpwbnijB’
‘~/tmp/scratch/Rtmpx7ABE3’ ‘~/tmp/scratch/RtmpxH7pTW’
‘~/tmp/scratch/RtmpxIQvCj’ ‘~/tmp/scratch/RtmpzI5IWP’
‘~/tmp/scratch/RtmpzV7OH7’ ‘~/tmp/scratch/RtmpzgfQEY’
‘~/tmp/scratch/xvfb-run.2JL79S’ ‘~/tmp/scratch/xvfb-run.5yj7AW’
‘~/tmp/scratch/xvfb-run.8Y84bj’ ‘~/tmp/scratch/xvfb-run.93HcN8’
‘~/tmp/scratch/xvfb-run.EyxIdi’ ‘~/tmp/scratch/xvfb-run.F7ALM3’
‘~/tmp/scratch/xvfb-run.HCqvwt’ ‘~/tmp/scratch/xvfb-run.JQoVz1’
‘~/tmp/scratch/xvfb-run.K9arzz’ ‘~/tmp/scratch/xvfb-run.LRtbhm’
‘~/tmp/scratch/xvfb-run.Nee7aR’ ‘~/tmp/scratch/xvfb-run.P1Fqb2’
‘~/tmp/scratch/xvfb-run.Q6CTpe’ ‘~/tmp/scratch/xvfb-run.QDNbOU’
‘~/tmp/scratch/xvfb-run.QRTj2A’ ‘~/tmp/scratch/xvfb-run.WPZIQc’
‘~/tmp/scratch/xvfb-run.aMghma’ ‘~/tmp/scratch/xvfb-run.as0Wst’
‘~/tmp/scratch/xvfb-run.bz0ZqJ’ ‘~/tmp/scratch/xvfb-run.dKbWAz’
‘~/tmp/scratch/xvfb-run.dz6Cwe’ ‘~/tmp/scratch/xvfb-run.f5BAc0’
‘~/tmp/scratch/xvfb-run.gHSlHu’ ‘~/tmp/scratch/xvfb-run.ldX2Za’
‘~/tmp/scratch/xvfb-run.pWwgIR’ ‘~/tmp/scratch/xvfb-run.u2M49y’
‘~/tmp/scratch/xvfb-run.xaEWUe’ ‘~/tmp/scratch/xvfb-run.ylmoae’
‘~/tmp/scratch/xvfb-run.ysqq9B’ ‘~/tmp/scratch/xvfb-run.zNeTKf’
‘/dev/shm/7d28dc80-17db-41a2-b364-c4beb63030d2’
‘/dev/shm/7d28dc80-17db-41a2-b364-c4beb63030d2_counter’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [3s/4s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biocharkitgui)
>
> test_check("biocharkitgui")
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 58 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-report.R:41:3'): gui_render_report renders a real HTML file from a populated store ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─biocharkitgui::gui_render_report(store, out) at test-report.R:41:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
── Error ('test-report.R:58:3'): gui_render_report handles an entirely empty store gracefully ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─biocharkitgui::gui_render_report(empty_store, out) at test-report.R:58:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 58 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-linux-x86_64