Last updated on 2026-08-01 01:52:17 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.4.0 | 3.57 | 121.19 | 124.76 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.4.0 | 2.45 | 86.50 | 88.95 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.4.0 | 110.99 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.4.0 | 85.81 | NOTE | |||
| r-devel-windows-x86_64 | 0.4.0 | 6.00 | 98.00 | 104.00 | ERROR | |
| r-patched-linux-x86_64 | 0.4.0 | 4.40 | 117.65 | 122.05 | OK | |
| r-release-linux-x86_64 | 0.4.0 | 3.52 | 118.38 | 121.90 | OK | |
| r-release-macos-arm64 | 0.4.0 | 1.00 | 36.00 | 37.00 | OK | |
| r-release-macos-x86_64 | 0.4.0 | 3.00 | 138.00 | 141.00 | OK | |
| r-release-windows-x86_64 | 0.4.0 | 6.00 | 151.00 | 157.00 | OK | |
| r-oldrel-macos-arm64 | 0.4.0 | 1.00 | 46.00 | 47.00 | OK | |
| r-oldrel-macos-x86_64 | 0.4.0 | 3.00 | 141.00 | 144.00 | OK | |
| r-oldrel-windows-x86_64 | 0.4.0 | 8.00 | 200.00 | 208.00 | OK |
Version: 0.4.0
Check: R code for possible problems
Result: NOTE
Found calls to structure() using deprecated special names:
butcher/tests/testthat/test-multnet.R (.Label: 1)
butcher/tests/testthat/test-randomForest.R (.Label: 1)
butcher/tests/testthat/test-train.R (.Label: 1)
'.Label' should be changed to 'levels'.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64
Version: 0.4.0
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp063mor’ ‘~/tmp/scratch/Rtmp0MXQsc’
‘~/tmp/scratch/Rtmp0efzFC’ ‘~/tmp/scratch/Rtmp1ABzIR’
‘~/tmp/scratch/Rtmp1eKUwf’ ‘~/tmp/scratch/Rtmp27QOnM’
‘~/tmp/scratch/Rtmp3j3L7q’ ‘~/tmp/scratch/Rtmp3o2y8F’
‘~/tmp/scratch/Rtmp3sXiEe’ ‘~/tmp/scratch/Rtmp4EKJbl’
‘~/tmp/scratch/Rtmp4n9nd8’ ‘~/tmp/scratch/Rtmp5AZoUz’
‘~/tmp/scratch/Rtmp5a0mrg’ ‘~/tmp/scratch/Rtmp69axUt’
‘~/tmp/scratch/Rtmp6CrYL5’ ‘~/tmp/scratch/Rtmp6PyMpa’
‘~/tmp/scratch/Rtmp7266sf’ ‘~/tmp/scratch/Rtmp82NmSu’
‘~/tmp/scratch/Rtmp93y1WY’ ‘~/tmp/scratch/Rtmp9avlgS’
‘~/tmp/scratch/Rtmp9wvfx2’ ‘~/tmp/scratch/RtmpA8ct8G’
‘~/tmp/scratch/RtmpALPvWb’ ‘~/tmp/scratch/RtmpAimWi0’
‘~/tmp/scratch/RtmpB4HVRh’ ‘~/tmp/scratch/RtmpBfX1Gd’
‘~/tmp/scratch/RtmpC1x7D1’ ‘~/tmp/scratch/RtmpClMacF’
‘~/tmp/scratch/RtmpCnZ5zy’ ‘~/tmp/scratch/RtmpD4CsaR’
‘~/tmp/scratch/RtmpDE40Oa’ ‘~/tmp/scratch/RtmpDcNdfF’
‘~/tmp/scratch/RtmpDzUenX’ ‘~/tmp/scratch/RtmpEItYlS’
‘~/tmp/scratch/RtmpEJUQr2’ ‘~/tmp/scratch/RtmpETGJNA’
‘~/tmp/scratch/RtmpEWHEUw’ ‘~/tmp/scratch/RtmpFUns8v’
‘~/tmp/scratch/RtmpFscQGl’ ‘~/tmp/scratch/RtmpGTfYz7’
‘~/tmp/scratch/RtmpH0gDuZ’ ‘~/tmp/scratch/RtmpHGp5ow’
‘~/tmp/scratch/RtmpHLs30O’ ‘~/tmp/scratch/RtmpHmNSBH’
‘~/tmp/scratch/RtmpHtqv6d’ ‘~/tmp/scratch/RtmpI4Quzh’
‘~/tmp/scratch/RtmpIfB6Tl’ ‘~/tmp/scratch/RtmpIloetr’
‘~/tmp/scratch/RtmpIxceQW’ ‘~/tmp/scratch/RtmpJj69hs’
‘~/tmp/scratch/RtmpKdMyxL’ ‘~/tmp/scratch/RtmpKoS30I’
‘~/tmp/scratch/RtmpM4q03Q’ ‘~/tmp/scratch/RtmpMfzpB5’
‘~/tmp/scratch/RtmpMpgkoh’ ‘~/tmp/scratch/RtmpNgBINJ’
‘~/tmp/scratch/RtmpNoP5tt’ ‘~/tmp/scratch/RtmpNpsbDn’
‘~/tmp/scratch/RtmpPQHHuh’ ‘~/tmp/scratch/RtmpQ4sZ6u’
‘~/tmp/scratch/RtmpQhE97y’ ‘~/tmp/scratch/RtmpRERH2f’
‘~/tmp/scratch/RtmpS0yF0c’ ‘~/tmp/scratch/RtmpSwaQac’
‘~/tmp/scratch/RtmpTekFOU’ ‘~/tmp/scratch/RtmpTodlcD’
‘~/tmp/scratch/RtmpTulppB’ ‘~/tmp/scratch/RtmpUDJk42’
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‘~/tmp/scratch/RtmpdOkEKF’ ‘~/tmp/scratch/RtmpdkEi5o’
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‘~/tmp/scratch/RtmpftNelG’ ‘~/tmp/scratch/RtmpgRZ0ZC’
‘~/tmp/scratch/Rtmpgv0X53’ ‘~/tmp/scratch/RtmpgvNdI7’
‘~/tmp/scratch/RtmphS87u5’ ‘~/tmp/scratch/RtmpiQoJHB’
‘~/tmp/scratch/RtmpiRrn63’ ‘~/tmp/scratch/RtmpiSJ2FP’
‘~/tmp/scratch/Rtmpj5QdcO’ ‘~/tmp/scratch/RtmpjOIFQG’
‘~/tmp/scratch/RtmpkK4uvJ’ ‘~/tmp/scratch/RtmpkUp4SP’
‘~/tmp/scratch/RtmpkWtCKK’ ‘~/tmp/scratch/RtmplI5DYX’
‘~/tmp/scratch/RtmplIKVOR’ ‘~/tmp/scratch/RtmplSKtGD’
‘~/tmp/scratch/Rtmpmcxqvs’ ‘~/tmp/scratch/RtmpmvNOZJ’
‘~/tmp/scratch/Rtmpn6tQHw’ ‘~/tmp/scratch/RtmpnJ8cwI’
‘~/tmp/scratch/RtmpnruOaN’ ‘~/tmp/scratch/RtmpolY1EU’
‘~/tmp/scratch/Rtmpq50IXV’ ‘~/tmp/scratch/RtmpqKoqRk’
‘~/tmp/scratch/RtmpqtOtUg’ ‘~/tmp/scratch/Rtmpr6NOlZ’
‘~/tmp/scratch/RtmprRiypr’ ‘~/tmp/scratch/Rtmps29kKg’
‘~/tmp/scratch/RtmpsG7e7c’ ‘~/tmp/scratch/Rtmpt6TfGI’
‘~/tmp/scratch/RtmptIgejO’ ‘~/tmp/scratch/RtmptSQYoa’
‘~/tmp/scratch/RtmpuX19mH’ ‘~/tmp/scratch/RtmpuxI1w9’
‘~/tmp/scratch/Rtmpv2Nz46’ ‘~/tmp/scratch/Rtmpv3EZL7’
‘~/tmp/scratch/RtmpvGBqxA’ ‘~/tmp/scratch/Rtmpva1Lee’
‘~/tmp/scratch/Rtmpvs5Fvq’ ‘~/tmp/scratch/RtmpwLrNrp’
‘~/tmp/scratch/RtmpxO0Uge’ ‘~/tmp/scratch/RtmpxgsgrW’
‘~/tmp/scratch/Rtmpxn9sbp’ ‘~/tmp/scratch/RtmpyAr5QA’
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‘~/tmp/scratch/xvfb-run.YEYnpC’ ‘~/tmp/scratch/xvfb-run.ZYDjkL’
‘~/tmp/scratch/xvfb-run.a7YpQ0’ ‘~/tmp/scratch/xvfb-run.cbNYVD’
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‘~/tmp/scratch/xvfb-run.d6h8ZH’ ‘~/tmp/scratch/xvfb-run.djj3y8’
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‘~/tmp/scratch/xvfb-run.qZmOF3’ ‘~/tmp/scratch/xvfb-run.s775RC’
‘~/tmp/scratch/xvfb-run.uGk3nk’ ‘~/tmp/scratch/xvfb-run.v0SOPZ’
‘~/tmp/scratch/xvfb-run.vicJpL’ ‘~/tmp/scratch/xvfb-run.vpLLXy’
‘~/tmp/scratch/xvfb-run.wrqZxq’ ‘~/tmp/scratch/xvfb-run.y7XLev’
‘~/tmp/scratch/xvfb-run.y90KYG’ ‘~/tmp/scratch/xvfb-run.yAlmza’
‘~/tmp/scratch/xvfb-run.zSTFIv’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.4.0
Check: examples
Result: ERROR
Running examples in 'butcher-Ex.R' failed
The error most likely occurred in:
> ### Name: axe-bart
> ### Title: Axing a bart model.
> ### Aliases: axe-bart axe_call.bart axe_fitted.bart
>
> ### ** Examples
>
> ## Don't show:
> if (rlang::is_installed("dbarts")) withAutoprint({ # examplesIf
+ ## End(Don't show)
+ library(dbarts)
+ x <- dbarts::bart(mtcars[,2:5], mtcars[,1], verbose = FALSE, keeptrees = TRUE)
+ res <- butcher(x, verbose = TRUE)
+ ## Don't show:
+ }) # examplesIf
> library(dbarts)
> x <- dbarts::bart(mtcars[, 2:5], mtcars[, 1], verbose = FALSE, keeptrees = TRUE)
Error in parse(text = deparse(RNGkind)[-1L]) :
<text>:1:22: unexpected ')'
1: binom.kind = NULL)
^
Calls: withAutoprint ... validObject -> anyStrings -> isTRUE -> validityMethod -> parse
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.4.0
Check: tests
Result: ERROR
Running 'testthat.R' [18s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(butcher)
>
> test_check("butcher")
Saving _problems/test-bart-5.R
Saving _problems/test-bart-16.R
Saving _problems/test-bart-26.R
Saving _problems/test-bart-39.R
Saving _problems/test-bart-55.R
1 package (dimRed) is needed for this step but is not installed.
To install run: `install.packages("dimRed")`
[ FAIL 5 | WARN 0 | SKIP 44 | PASS 198 ]
══ Skipped tests (44) ══════════════════════════════════════════════════════════
• On CRAN (43): 'test-c5.R:2:3', 'test-earth.R:2:3', 'test-earth.R:31:3',
'test-elnet.R:2:3', 'test-flexsurvreg.R:2:3', 'test-flexsurvreg.R:18:3',
'test-flexsurvreg.R:56:3', 'test-gausspr.R:2:3', 'test-glmnet.R:2:3',
'test-kknn.R:2:3', 'test-klaR.R:2:3', 'test-klaR.R:16:3', 'test-ksvm.R:2:3',
'test-mda.R:2:3', 'test-mda.R:24:3', 'test-mda.R:98:3',
'test-mixOmics.R:2:3', 'test-mixOmics.R:21:3', 'test-mixOmics.R:40:3',
'test-multnet.R:2:3', 'test-new.R:1:1', 'test-nnet.R:2:3',
'test-randomForest.R:2:3', 'test-rpart.R:2:3', 'test-rpart.R:22:3',
'test-rsample.R:1:1', 'test-rsample.R:21:1', 'test-rsample.R:34:1',
'test-rsample.R:55:1', 'test-rsample.R:72:1', 'test-sclass.R:2:3',
'test-survreg.R:2:3', 'test-survreg.penal.R:2:3', 'test-tabnet_fit.R:2:3',
'test-tabnet_fit.R:20:3', 'test-tabnet_fit.R:37:3', 'test-train.R:2:3',
'test-train.R:44:3', 'test-train.recipe.R:9:3', 'test-ui.R:1:1',
'test-weigh.R:1:1', 'test-xgb.R:6:3', 'test-xgb.R:51:3'
• {mixOmics} is not installed (1): 'test-recipe.R:454:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-bart.R:5:3'): dbarts + axe_call() works ────────────────────────
Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
1: binom.kind = NULL)
^
Backtrace:
▆
1. └─dbarts::bart(mtcars[, 2:5], mtcars[, 1], verbose = FALSE) at test-bart.R:5:3
2. └─dbarts::dbartsControl(...)
3. └─methods::new(...)
4. ├─methods::initialize(value, ...)
5. └─dbarts (local) initialize(value, ...)
6. ├─methods::callNextMethod()
7. └─methods (local) .nextMethod(.Object = .Object, ... = ...)
8. └─methods::validObject(.Object)
9. ├─methods (local) anyStrings(validityMethod(object))
10. │ └─base::isTRUE(x)
11. └─dbarts (local) validityMethod(object)
12. └─base::parse(text = deparse(RNGkind)[-1L])
── Error ('test-bart.R:11:3'): dbarts + axe_fitted() works ─────────────────────
Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
1: binom.kind = NULL)
^
Backtrace:
▆
1. └─dbarts::bart(mtcars[, 2:5], mtcars[, 1], mtcars[1:5, 2:5], verbose = FALSE) at test-bart.R:11:3
2. └─dbarts::dbartsControl(...)
3. └─methods::new(...)
4. ├─methods::initialize(value, ...)
5. └─dbarts (local) initialize(value, ...)
6. ├─methods::callNextMethod()
7. └─methods (local) .nextMethod(.Object = .Object, ... = ...)
8. └─methods::validObject(.Object)
9. ├─methods (local) anyStrings(validityMethod(object))
10. │ └─base::isTRUE(x)
11. └─dbarts (local) validityMethod(object)
12. └─base::parse(text = deparse(RNGkind)[-1L])
── Error ('test-bart.R:26:3'): dbarts + butcher() works ────────────────────────
Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
1: binom.kind = NULL)
^
Backtrace:
▆
1. └─dbarts::bart(mtcars[, 2:5], mtcars[, 1], verbose = FALSE) at test-bart.R:26:3
2. └─dbarts::dbartsControl(...)
3. └─methods::new(...)
4. ├─methods::initialize(value, ...)
5. └─dbarts (local) initialize(value, ...)
6. ├─methods::callNextMethod()
7. └─methods (local) .nextMethod(.Object = .Object, ... = ...)
8. └─methods::validObject(.Object)
9. ├─methods (local) anyStrings(validityMethod(object))
10. │ └─base::isTRUE(x)
11. └─dbarts (local) validityMethod(object)
12. └─base::parse(text = deparse(RNGkind)[-1L])
── Error ('test-bart.R:34:3'): dbarts + predict() works ────────────────────────
Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
1: binom.kind = NULL)
^
Backtrace:
▆
1. └─dbarts::bart(mtcars[, 2:5], mtcars[, 1], verbose = FALSE, keeptrees = TRUE) at test-bart.R:34:3
2. └─dbarts::dbartsControl(...)
3. └─methods::new(...)
4. ├─methods::initialize(value, ...)
5. └─dbarts (local) initialize(value, ...)
6. ├─methods::callNextMethod()
7. └─methods (local) .nextMethod(.Object = .Object, ... = ...)
8. └─methods::validObject(.Object)
9. ├─methods (local) anyStrings(validityMethod(object))
10. │ └─base::isTRUE(x)
11. └─dbarts (local) validityMethod(object)
12. └─base::parse(text = deparse(RNGkind)[-1L])
── Error ('test-bart.R:55:3'): bart() from parsnip + predict() works ───────────
Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
1: binom.kind = NULL)
^
Backtrace:
▆
1. ├─generics::fit(spec, mpg ~ ., mtcars) at test-bart.R:55:3
2. ├─parsnip::fit.model_spec(spec, mpg ~ ., mtcars)
3. │ └─parsnip:::form_xy(...)
4. │ └─parsnip:::xy_xy(...)
5. │ └─parsnip:::eval_mod(...)
6. │ └─rlang::eval_tidy(e, env = envir, ...)
7. └─dbarts::bart(...)
8. └─dbarts::dbartsControl(...)
9. └─methods::new(...)
10. ├─methods::initialize(value, ...)
11. └─dbarts (local) initialize(value, ...)
12. ├─methods::callNextMethod()
13. └─methods (local) .nextMethod(.Object = .Object, ... = ...)
14. └─methods::validObject(.Object)
15. ├─methods (local) anyStrings(validityMethod(object))
16. │ └─base::isTRUE(x)
17. └─dbarts (local) validityMethod(object)
18. └─base::parse(text = deparse(RNGkind)[-1L])
[ FAIL 5 | WARN 0 | SKIP 44 | PASS 198 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-windows-x86_64