Facilitates spatial and general latent Gaussian modelling using
integrated nested Laplace approximation via the INLA package (<https://www.r-inla.org>).
Additionally, extends the GAM-like model class to more general nonlinear predictor
expressions, and implements a log Gaussian Cox process likelihood for
modelling univariate and spatial point processes based on ecological survey data.
Model components are specified with general inputs and mapping methods to the
latent variables, and the predictors are specified via general R expressions,
with separate expressions for each observation likelihood model in
multi-likelihood models. A prediction method based on fast Monte Carlo sampling
allows posterior prediction of general expressions of the latent variables.
Ecology-focused introduction in Bachl, Lindgren, Borchers, and Illian (2019)
<doi:10.1111/2041-210X.13168>.
| Version: |
2.15.0 |
| Depends: |
methods, R (≥ 4.1.0) |
| Imports: |
dplyr, fmesher (≥ 0.7.0), generics, glue, lifecycle, MatrixModels, Matrix, Rcpp, rlang, sf, stats, tibble, utils, withr |
| LinkingTo: |
Rcpp |
| Suggests: |
covr, ggplot2, graphics, INLA (≥ 23.01.31), knitr, maps, mgcv, patchwork, raster, RColorBrewer, rgl, rmarkdown, scales, scoringRules, shiny, sn, sp (≥ 2.1), spatstat.geom, spatstat.data, sphereplot, splancs, terra (≥ 1.7-66), tidyterra, testthat (≥ 3.2.0), tidyr, DiagrammeR, doclisting |
| Enhances: |
stars |
| Published: |
2026-07-28 |
| DOI: |
10.32614/CRAN.package.inlabru |
| Author: |
Finn Lindgren 
[aut, cre, cph] (Finn Lindgren continued development of the main
code),
Fabian E. Bachl [aut, cph] (Fabian Bachl wrote the main code),
David L. Borchers [ctb, dtc, cph] (David Borchers wrote code for
Gorilla data import and sampling, multiplot tool),
Daniel Simpson [ctb, cph] (Daniel Simpson wrote the basic LGCP sampling
method),
Lindesay Scott-Howard [ctb, dtc, cph] (Lindesay Scott-Howard provided
MRSea data import code),
Andy Seaton [ctb] (Andy Seaton provided testing, bugfixes, and
vignettes),
Man Ho Suen [ctb,
cph] (Man Ho Suen contributed features for aggregated responses and
vignette updates),
Pierre Roudier [ctb, cph] (Pierre Roudier contributed general quantile
summaries),
Tim Meehan [ctb, cph] (Tim Meehan contributed the SVC vignette and
robins data),
Niharika Reddy Peddinenikalva [ctb, cph] (Niharika Peddinenikalva
contributed the LGCP residuals vignette),
Dmytro Perepolkin [ctb, cph] (Dmytro Perepolkin contributed the ZIP/ZAP
vignette),
Novica Nakov
[ctb],
Hans Montcho
[ctb, cph] (Hans Montcho contributed features for joint cross
validation) |
| Maintainer: |
Finn Lindgren <finn.lindgren at gmail.com> |
| BugReports: |
https://github.com/inlabru-org/inlabru/issues |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: |
http://www.inlabru.org, https://inlabru-org.github.io/inlabru/,
https://github.com/inlabru-org/inlabru |
| NeedsCompilation: |
yes |
| Additional_repositories: |
https://inla.r-inla-download.org/R/testing |
| Citation: |
inlabru citation info |
| Materials: |
README, NEWS |
| In views: |
MixedModels |
| CRAN checks: |
inlabru results |